URMC / Labs / Wedekind Lab / Publications Publications Schroeder GMKiliushik DJenkins JLWedekind JE Structure and function analysis of a type III preQ1-I riboswitch from E. coli reveals direct metabolite-sensing by the Shine-Dalgarno sequence.; The Journal of biological chemistry. 2023 Sep 01. Kretsch RCAndersen ESBujnicki JMChiu WDas RLuo BMasquida BMcRae EKSSchroeder GMSu ZWedekind JEXu LZhang KZheludev INMoult JKryshtafovych A RNA target highlights in CASP15: Evaluation of predicted models by structure providers.; Proteins. 2023 Jul 19. Wedekind JE RNA in the loop: Probing T-loop/T-loop receptor interactions as mediators of long-range RNA contacts that influence gene regulation.; Journal of molecular biology. 2023 Apr 06. Schroeder GMAkinyemi OMalik JFocht CMPritchett EMBaker CDMcSally JPJenkins JLMathews DHWedekind JE A riboswitch separated from its ribosome-binding site still regulates translation.; Nucleic acids research. 2023 Feb 10. Srivastava YBlau MEJenkins JLWedekind JE Full-Length NAD+-I Riboswitches Bind a Single Cofactor but Cannot Discriminate against Adenosine Triphosphate.; Biochemistry. 2023 Jan 10. Cavender CESchroeder GMMathews DHWedekind JE Isothermal Titration Calorimetry Analysis of a Cooperative Riboswitch Using an Interdependent-Sites Binding Model.; Methods in molecular biology (Clifton, N.J.); Vol 2568, pp. 53-73. 2023. Schroeder GMCavender CEBlau MEJenkins JLMathews DHWedekind JE ; Nature communications; Vol 13(1). 2022 Jan 11. Chavali SSMali SMBonn RSaseendran ABennett RPSmith HCFasan RWedekind JE ; The Journal of biological chemistry. 2021 Nov 09. Srivastava YBonn-Breach RChavali SSLippa GMJenkins JLWedekind JE ; Crystals; Vol 11(3). 2021 Mar. Chavali SSMali SMJenkins JLFasan RWedekind JE ; The Journal of biological chemistry; Vol 295(49). 2020 Dec 04. Chavali SSCavender CEMathews DHWedekind JE ; Journal of the American Chemical Society. 2020 Nov 10. Schroeder GMDutta DCavender CEJenkins JLPritchett EMBaker CDAshton JMMathews DHWedekind JE ; Nucleic acids research. 2020 Jun 29. Bonn-Breach RGu YJenkins JFasan RWedekind J ; Acta crystallographica. Section D, Structural biology; Vol 75(Pt 11). 2019 Nov 01. Dutta DWedekind JE ; The Journal of biological chemistry. 2019 Oct 28. Chavali SSBonn-Breach RWedekind JE ; The Journal of biological chemistry. 2019 May 12. Warnasooriya CLing CBelashov IASalim MWedekind JEErmolenko DN ; RNA biology. 2018 Oct 17. Belashov IACrawford DWCavender CEDai PBeardslee PCMathews DHPentelute BLMcNaughton BRWedekind JE ; Nucleic acids research. 2018 Jun 29. Dutta DBelashov IAWedekind JE ; Biochemistry. 2018 Jun 13. Wedekind JEDutta DBelashov IAJenkins JL ; The Journal of biological chemistry. 2017 Apr 28. Jenkins JLWedekind JE ; Methods in molecular biology (Clifton, N.J.); Vol 1490. 2016. Dutta DWedekind JE ; Journal of molecular biology; Vol 427(22). 2015 Nov 6. Aytenfisu AHLiberman JAWedekind JEMathews DH ; RNA (New York, N.Y.); Vol 21(11). 2015 Nov. Liberman JASuddala KCAytenfisu AChan DBelashov IASalim MMathews DHSpitale RCWalter NGWedekind JE ; Proceedings of the National Academy of Sciences of the United States of America; Vol 112(27). 2015 Jul 7. Heldenbrand HJanowski PAGiambaşu GGiese TJWedekind JEYork DM ; Journal of the American Chemical Society; Vol 136(22). 2014 Jun 4. Liberman JABogue JTJenkins JLSalim MWedekind JE ; Methods in enzymology; Vol 549. 2014. Suddala KCRinaldi AJFeng JMustoe AMEichhorn CDLiberman JAWedekind JEAl-Hashimi HMBrooks CLWalter NG ; Nucleic acids research; Vol 41(22). 2013 Dec. Can MKrucinska JZoppellaro GAndersen NHWedekind JEHersleth HPAndersson KKBren KL ; Chembiochem : a European journal of chemical biology; Vol 14(14). 2013 Sep 23. Liberman JASalim MKrucinska JWedekind JE ; Nature chemical biology; Vol 9(6). 2013 Jun. Wang WMaucuer AGupta AManceau VThickman KRBauer WJKennedy SDWedekind JEGreen MRKielkopf CL ; Structure (London, England : 1993); Vol 21(2). 2013 Feb 5. Salter JDLippa GMBelashov IAWedekind JE ; Biochemistry; Vol 51(44). 2012 Nov 6. Banáš PSklenovský PWedekind JEŠponer JOtyepka M ; The journal of physical chemistry. B; Vol 116(42). 2012 Oct 25. Liberman JAGuo MJenkins JLKrucinska JChen YCarey PRWedekind JE ; Journal of the American Chemical Society; Vol 134(41). 2012 Oct 17. Liberman JAWedekind JE ; Wiley interdisciplinary reviews. RNA; Vol 3(3). 2012 May. Lippa GMLiberman JAJenkins JLKrucinska JSalim MWedekind JE ; Methods in molecular biology (Clifton, N.J.); Vol 848. 2012. Jenkins JLKrucinska JMcCarty RMBandarian VWedekind JE ; The Journal of biological chemistry; Vol 286(28). 2011 Jul 15. Liberman JAWedekind JE ; Current opinion in structural biology; Vol 21(3). 2011 Jun. Wedekind JE ; Structure (London, England : 1993); Vol 18(7). 2010 Jul 14. Salter JDKrucinska JRaina JSmith HCWedekind JE ; Biochemistry; Vol 48(45). 2009 Nov 17. Spitale RCWedekind JE ; Methods (San Diego, Calif.); Vol 49(2). 2009 Oct. Guo MSpitale RCVolpini RKrucinska JCristalli GCarey PRWedekind JE ; Journal of the American Chemical Society; Vol 131(36). 2009 Sep 16. Spitale RCVolpini RMungillo MVKrucinska JCristalli GWedekind JE ; Biochemistry; Vol 48(33). 2009 Aug 25. Spitale RCVolpini RHeller MGKrucinska JCristalli GWedekind JE ; Journal of the American Chemical Society; Vol 131(17). 2009 May 6. Spitale RCTorelli ATKrucinska JBandarian VWedekind JE ; The Journal of biological chemistry; Vol 284(17). 2009 Apr 24. Bennett RPSalter JDLiu XWedekind JESmith HC ; The Journal of biological chemistry; Vol 283(48). 2008 Nov 28. MacElrevey CSalter JDKrucinska JWedekind JE ; RNA (New York, N.Y.); Vol 14(8). 2008 Aug. Torelli ATSpitale RCKrucinska JWedekind JE ; Biochemical and biophysical research communications; Vol 371(1). 2008 Jun 20. Jamburuthugoda VKSantos-Velazquez JMSkasko MOperario DJPurohit VChugh PSzymanski EAWedekind JEBambara RAKim B ; The Journal of biological chemistry; Vol 283(14). 2008 Apr 4. Bennett RPPresnyak VWedekind JESmith HC ; The Journal of biological chemistry; Vol 283(12). 2008 Mar 21. Spitale RCHeller MGPelly AJWedekind JE ; The Journal of organic chemistry; Vol 72(22). 2007 Oct 26. MacElrevey CSpitale RCKrucinska JWedekind JE ; Acta crystallographica. Section D, Biological crystallography; Vol 63(Pt 7). 2007 Jul.