David H. Mathews, M.D., Ph.D.
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David H. Mathews, M.D., Ph.D.
About Me
Faculty Appointments
Professor - Department of Biochemistry and Biophysics (SMD)
Lynne E. Maquat Distinguished Professor - Department of Biochemistry and Biophysics (SMD)
Credentials
Education
MD | Univ Rochester Sch Med/Dent. Medicine. 2003
PhD | University of Rochester. Chemistry. 2002
BS | University of Rochester. Physics. 1994
Research
Research in the Mathews lab spans the fields of Computational Biology and Bioinformatics. We are interested in predicting RNA structure and we develop computational tools for targeting RNA with pharmaceuticals and for using RNA as a pharmaceutical (Mathews et al., 1999a).
In collaboration with Doug Turner (University of Rochester) and Michael Zuker (RPI), we have developed software that predicts secondary structure, i.e. the canonical base pairs (Mathews et al., 2004; Mathews et al., 1999b). On average, 73% of base pairs are correctly predicted in a set of diverse sequences with known structures. This accuracy can be improved by constraining the structure prediction using data derived from experiments.
We have also developed software that uses a partition function to predict base pairing probabilities (Mathews, 2004). Using this algorithm, secondary structures can be color annotated according to pairing probability to graphically demonstrate both high probability pairs and low probability pairs that are, on average, not as accurate.
Finally, we are developing methods to predict a secondary structure common to multiple sequences (Mathews & Turner, 2002). The accuracy of structure predictions is dramatically improved by using the information contained in multiple sequences. For example, for a set of poorly predicted 5S rRNA sequences, the average accuracy of base pair prediction improves from 47.8% to 86.4% when the structure common to two sequences is determined.
Publications
Journal Articles
Zhu M, Mathews DH
Methods in molecular biology.. 2025 2847 :17-31. Epub 1900 01 01.
Oberstrass L, Tants JN, Lichtenthaeler C, Ali SE, Koch L, Mathews DH, Schlundt A, Weigand J
Angewandte Chemie.. 2024 September 30 :e202412596. Epub 09/30/2024.
Casadio R, Mathews DH, Sternberg MJE
Journal of molecular biology.. 2024 August 6 :168739. Epub 08/06/2024.
Malik A, Zhang L, Gautam M, Dai N, Li S, Zhang H, Mathews DH, Huang L
Journal of molecular biology.. 2024 July 4 :168694. Epub 07/04/2024.
Mittal A, Turner DH, Mathews DH
Journal of molecular biology.. 2024 March 24 :168549. Epub 03/24/2024.
Zuber J, Mathews DH
Methods in molecular biology.. 2024 2726 :1-13. Epub 1900 01 01.
Zhang H, Li S, Dai N, Zhang L, Mathews DH, Huang L
Nucleic acids research.. 2023 October 1351 (18):e94. Epub 1900 01 01.
Hedaya OM, Venkata Subbaiah KC, Jiang F, Xie LH, Wu J, Khor ES, Zhu M, Mathews DH, Proschel C, Yao P
Nature communications.. 2023 October 314 (1):6166. Epub 10/03/2023.
Pham TM, Miffin T, Sun H, Sharp KK, Wang X, Zhu M, Hoshika S, Peterson RJ, Benner SA, Kahn JD, Mathews DH
ACS synthetic biology.. 2023 September 1512 (9):2750-2763. Epub 09/06/2023.
Zhang H, Zhang L, Lin A, Xu C, Li Z, Liu K, Liu B, Ma X, Zhao F, Jiang H, Chen C, Shen H, Li H, Mathews DH, Zhang Y, Huang L
Nature.. 2023 September 621 (7978):396-403. Epub 05/02/2023.
Zuber J, Sah SK, Mathews DH, Rustchenko E
Microorganisms.. 2023 July 2511 (8)Epub 07/25/2023.
Mathews DH, Casadio R, Sternberg MJE
Journal of molecular biology.. 2023 July 15435 (14):168160. Epub 05/25/2023.
Ali SE, Mittal A, Mathews DH
Current protocols.. 2023 July 3 (7):e846. Epub 1900 01 01.
Zhou T, Dai N, Li S, Ward M, Mathews DH, Huang L
Bioinformatics.. 2023 June 3039 (39 Suppl 1):i563-i571. Epub 1900 01 01.
Zhou T, Gilliam NJ, Li S, Spandau S, Osborn RM, Connor S, Anderson CS, Mariani TJ, Thakar J, Dewhurst S, Mathews DH, Huang L, Sun Y
mBio.. 2023 June 2714 (3):e0025023. Epub 04/19/2023.
Hedaya OM, Subbaiah KCV, Jiang F, Xie LH, Wu J, Khor E, Zhu M, Mathews DH, Proschel C, Yao P
bioRxiv : the preprint server for biology.. 2023 June 15 Epub 06/15/2023.
Pham TM, Miffin T, Sun H, Sharp KK, Wang X, Zhu M, Hoshika S, Peterson RJ, Benner SA, Kahn JD, Mathews DH
bioRxiv : the preprint server for biology.. 2023 June 8 Epub 06/08/2023.
Mirska B, Wo?niak T, Lorent D, Ruszkowska A, Peterson JM, Moss WN, Mathews DH, Kierzek R, Kierzek E
Cellular and molecular life sciences : CMLS.. 2023 May 280 (5):136. Epub 05/02/2023.
Schroeder GM, Akinyemi O, Malik J, Focht CM, Pritchett EM, Baker CD, McSally JP, Jenkins JL, Mathews DH, Wedekind JE
Nucleic acids research.. 2023 March 2151 (5):2464-2484. Epub 1900 01 01.
Zhang H, Li S, Zhang L, Mathews DH, Huang L
Nucleic acids research.. 2023 January 2551 (2):e7. Epub 1900 01 01.
Cavender CE, Schroeder GM, Mathews DH, Wedekind JE
Methods in molecular biology.. 2023 2568 :53-73. Epub 1900 01 01.
Zhang H, Zhang L, Liu K, Li S, Mathews DH, Huang L
Methods in molecular biology.. 2023 2586 :15-34. Epub 1900 01 01.
Lai WC, Zhu M, Belinite M, Ballard G, Mathews DH, Ermolenko DN
Journal of molecular biology.. 2022 December 30434 (24):167877. Epub 11/08/2022.
Szabat M, Prochota M, Kierzek R, Kierzek E, Mathews DH
Journal of molecular biology.. 2022 September 30434 (18):167632. Epub 05/16/2022.
Szikszai M, Wise M, Datta A, Ward M, Mathews DH
Bioinformatics.. 2022 August 1038 (16):3892-3899. Epub 1900 01 01.
Casadio R, Mathews DH, Sternberg MJE
Journal of molecular biology.. 2022 June 15434 (11):167625. Epub 05/13/2022.
Kumar J, Lackey L, Waldern JM, Dey A, Mustoe AM, Weeks K, Mathews DH, Laederach A
eLife.. 2022 June 1311 Epub 06/13/2022.
Glasser E, Maji D, Biancon G, Puthenpeedikakkal AMK, Cavender CE, Tebaldi T, Jenkins JL, Mathews DH, Halene S, Kielkopf CL
Nucleic acids research.. 2022 May 2050 (9):5299-5312. Epub 1900 01 01.
Zuber J, Schroeder SJ, Sun H, Turner DH, Mathews DH
Nucleic acids research.. 2022 May 2050 (9):5251-5262. Epub 1900 01 01.
Kierzek E, Zhang X, Watson RM, Kennedy SD, Szabat M, Kierzek R, Mathews DH
Nature communications.. 2022 March 1113 (1):1271. Epub 03/11/2022.
Szutkowska B, Wieczorek K, Kierzek R, Zmora P, Peterson JM, Moss WN, Mathews DH, Kierzek E
International journal of molecular sciences.. 2022 February 2323 (5)Epub 02/23/2022.
Bao C, Zhu M, Nykonchuk I, Wakabayashi H, Mathews DH, Ermolenko DN
Nature communications.. 2022 February 2113 (1):988. Epub 02/21/2022.
Schroeder GM, Cavender CE, Blau ME, Jenkins JL, Mathews DH, Wedekind JE
Nature communications.. 2022 January 1113 (1):199. Epub 01/11/2022.
Li S, Zhang H, Zhang L, Liu K, Liu B, Mathews DH, Huang L
Proceedings of the National Academy of Sciences of the United States of America.. 2021 December 28118 (52)Epub 1900 01 01.
Zhang H, Zhang L, Li S, Mathews DH, Huang L
bioRxiv : the preprint server for biology.. 2021 November 24 Epub 11/24/2021.
Ermolenko DN, Mathews DH
Wiley interdisciplinary reviews. RNA.. 2021 March 12 (2):e1611. Epub 06/29/2020.
Kayedkhordeh M, Yamagami R, Bevilacqua PC, Mathews DH
Methods in molecular biology.. 2021 2167 :113-143. Epub 1900 01 01.
Chavali SS, Cavender CE, Mathews DH, Wedekind JE
Journal of the American Chemical Society.. 2020 November 25142 (47):19835-19839. Epub 11/10/2020.
Schroeder GM, Dutta D, Cavender CE, Jenkins JL, Pritchett EM, Baker CD, Ashton JM, Mathews DH, Wedekind JE
Nucleic acids research.. 2020 August 2048 (14):8146-8164. Epub 1900 01 01.
Zhang H, Zhang L, Mathews DH, Huang L
Bioinformatics.. 2020 July 136 (Suppl_1):i258-i267. Epub 1900 01 01.
Ward M, Sun H, Datta A, Wise M, Mathews DH
Bioinformatics.. 2019 November 135 (21):4298-4306. Epub 1900 01 01.
Tuladhar R, Yeu Y, Tyler Piazza J, Tan Z, Rene Clemenceau J, Wu X, Barrett Q, Herbert J, Mathews DH, Kim J, Hyun Hwang T, Lum L
Nature communications.. 2019 September 610 (1):4056. Epub 09/06/2019.
Huang L, Zhang H, Deng D, Zhao K, Liu K, Hendrix DA, Mathews DH
Bioinformatics.. 2019 July 1535 (14):i295-i304. Epub 1900 01 01.
Mathews DH
Methods : a companion to Methods in enzymology.. 2019 June 1162-163 :60-67. Epub 04/02/2019.
Zuber J, Mathews DH
RNA.. 2019 June 25 (6):747-754. Epub 04/05/2019.
Ghoneim DH, Zhang X, Brule CE, Mathews DH, Grayhack EJ
Nucleic acids research.. 2019 February 2047 (3):1164-1177. Epub 1900 01 01.
Yamagami R, Kayedkhordeh M, Mathews DH, Bevilacqua PC
Nucleic acids research.. 2019 January 1047 (1):29-42. Epub 1900 01 01.
Braun J, Fischer S, Xu ZZ, Sun H, Ghoneim DH, Gimbel AT, Plessmann U, Urlaub H, Mathews DH, Weigand JE
Nucleic acids research.. 2018 December 1446 (22):12109-12125. Epub 1900 01 01.
Smith LG, Tan Z, Spasic A, Dutta D, Salas-Estrada LA, Grossfield A, Mathews DH
Journal of chemical theory and computation.. 2018 December 1114 (12):6598-6612. Epub 11/27/2018.
Bellaousov S, Kayedkhordeh M, Peterson RJ, Mathews DH
RNA.. 2018 November 24 (11):1555-1567. Epub 08/10/2018.
Zuber J, Cabral BJ, McFadyen I, Mauger DM, Mathews DH
RNA.. 2018 November 24 (11):1568-1582. Epub 08/13/2018.
Lai WC, Kayedkhordeh M, Cornell EV, Farah E, Bellaousov S, Rietmeijer R, Salsi E, Mathews DH, Ermolenko DN
Nature communications.. 2018 October 189 (1):4328. Epub 10/18/2018.
Belashov IA, Crawford DW, Cavender CE, Dai P, Beardslee PC, Mathews DH, Pentelute BL, McNaughton BR, Wedekind JE
Nucleic acids research.. 2018 July 2746 (13):6401-6415. Epub 1900 01 01.
Spasic A, Berger KD, Chen JL, Seetin MG, Turner DH, Mathews DH
Nucleic acids research.. 2018 June 146 (10):4883-4892. Epub 1900 01 01.
Spasic A, Kennedy SD, Needham L, Manoharan M, Kierzek R, Turner DH, Mathews D
RNA.. 2018 May 24 (5):656-672. Epub 02/06/2018.
Berger KD, Kennedy SD, Schroeder SJ, Znosko BM, Sun H, Mathews DH, Turner DH
Biochemistry.. 2018 April 1057 (14):2121-2131. Epub 03/23/2018.
Payea MJ, Sloma MF, Kon Y, Young DL, Guy MP, Zhang X, De Zoysa T, Fields S, Mathews DH, Phizicky EM
RNA.. 2018 March 24 (3):410-422. Epub 12/19/2017.
Spasic A, Assmann SM, Bevilacqua PC, Mathews DH
Nucleic acids research.. 2018 January 946 (1):314-323. Epub 1900 01 01.
Tan Z, Fu Y, Sharma G, Mathews DH
Nucleic acids research.. 2017 November 1645 (20):11570-11581. Epub 1900 01 01.
Sloma MF, Mathews DH
PLoS computational biology.. 2017 November 13 (11):e1005827. Epub 11/06/2017.
Smith LG, Zhao J, Mathews DH, Turner DH
Wiley interdisciplinary reviews. RNA.. 2017 September 8 (5)Epub 1900 01 01.
Ward M, Datta A, Wise M, Mathews DH
Nucleic acids research.. 2017 August 2145 (14):8541-8550. Epub 1900 01 01.
Tan Z, Sharma G, Mathews DH
Biophysical journal.. 2017 July 25113 (2):330-338. Epub 07/20/2017.
Zuber J, Sun H, Zhang X, McFadyen I, Mathews DH
Nucleic acids research.. 2017 June 245 (10):6168-6176. Epub 1900 01 01.
Gamache ER, Doh JH, Ritz J, Laederach A, Bellaousov S, Mathews DH, Curcio MJ
Viruses.. 2017 April 269 (5)Epub 04/26/2017.
Aytenfisu AH, Spasic A, Grossfield A, Stern HA, Mathews DH
Journal of chemical theory and computation.. 2017 February 1413 (2):900-915. Epub 01/24/2017.
Mathews DH, Turner DH, Watson RM
Current protocols in nucleic acid chemistry. 2016 December 167 :11.2.1-11.2.19. Epub 12/01/2016.
Sloma MF, Mathews DH
RNA.. 2016 December 22 (12):1808-1818. Epub 10/19/2016.
DiChiacchio L, Sloma MF, Mathews DH
Bioinformatics.. 2016 April 132 (7):1033-9. Epub 11/20/2015.
Leamy KA, Assmann SM, Mathews DH, Bevilacqua PC
Quarterly reviews of biophysics.. 2016 January 49 :e10. Epub 06/24/2016.
Xu ZZ, Mathews DH
Methods in molecular biology.. 2016 1490 :15-34. Epub 1900 01 01.
Xu ZZ, Mathews DH
Methods in molecular biology.. 2016 1490 :35-50. Epub 1900 01 01.
DiChiacchio L, Mathews DH
Methods in molecular biology.. 2016 1490 :51-62. Epub 1900 01 01.
Xu ZZ, Mathews DH
Methods in molecular biology.. 2016 1490 :163-76. Epub 1900 01 01.
Chen JL, Bellaousov S, Tubbs JD, Kennedy SD, Lopez MJ, Mathews DH, Turner DH
Biochemistry.. 2015 November 1754 (45):6769-82. Epub 11/03/2015.
Aytenfisu AH, Liberman JA, Wedekind JE, Mathews DH
RNA.. 2015 November 21 (11):1898-907. Epub 09/14/2015.
Wu Y, Shi B, Ding X, Liu T, Hu X, Yip KY, Yang ZR, Mathews DH, Lu ZJ
Nucleic acids research.. 2015 September 343 (15):7247-59. Epub 07/13/2015.
Liberman JA, Suddala KC, Aytenfisu A, Chan D, Belashov IA, Salim M, Mathews DH, Spitale RC, Walter NG, Wedekind JE
Proceedings of the National Academy of Sciences of the United States of America.. 2015 July 7112 (27):E3485-94. Epub 06/23/2015.
Sloma MF, Mathews DH
Methods in enzymology.. 2015 553 :91-114. Epub 02/03/2015.
Fu Y, Xu ZZ, Lu ZJ, Zhao S, Mathews DH
PloS one.. 2015 10 (6):e0130200. Epub 06/15/2015.
Fu Y, Sharma G, Mathews DH
Nucleic acids research.. 2014 December 1642 (22):13939-48. Epub 1900 01 01.
Zhang X, Walker RC, Phizicky EM, Mathews DH
Journal of chemical theory and computation.. 2014 August 1210 (8):3473-3483. Epub 05/28/2014.
Guy MP, Young DL, Payea MJ, Zhang X, Kon Y, Dean KM, Grayhack EJ, Mathews DH, Fields S, Phizicky EM
Genes & development.. 2014 August 128 (15):1721-32. Epub 1900 01 01.
Mathews DH
Current protocols in bioinformatics. 2014 June 1746 :12.4.1-12.4.22. Epub 06/17/2014.
Mathews DH
Current protocols in bioinformatics. 2014 June 1746 :12.6.1-12.6.25. Epub 06/17/2014.
Aytenfisu AH, Spasic A, Seetin MG, Serafini J, Mathews DH
Journal of chemical theory and computation.. 2014 March 1110 (3):1292-1301. Epub 01/22/2014.
Stern HA, Mathews DH
Algorithms for molecular biology : AMB.. 2013 November 18 (1):29. Epub 11/01/2013.
Bellaousov S, Reuter JS, Seetin MG, Mathews DH
Nucleic acids research.. 2013 July 41 (Web Server issue):W471-4. Epub 04/24/2013.
Shen M, Bellaousov S, Hiller M, de La Grange P, Creamer TP, Malina O, Sperling R, Mathews DH, Stoilov P, Stamm S
Nucleic acids research.. 2013 April 141 (6):3819-32. Epub 02/07/2013.
Schmidt K, Xu Z, Mathews DH, Butler JS
RNA.. 2012 October 18 (10):1934-45. Epub 08/24/2012.
Spasic A, Serafini J, Mathews DH
Journal of chemical theory and computation.. 2012 July 108 (7):2497-2505. Epub 06/05/2012.
Seetin MG, Mathews DH
Bioinformatics.. 2012 March 1528 (6):792-8. Epub 01/27/2012.
Xu Z, Almudevar A, Mathews DH
Nucleic acids research.. 2012 February 40 (4):e26. Epub 12/01/2011.
Seetin MG, Mathews DH
Methods in molecular biology.. 2012 905 :99-122. Epub 1900 01 01.
Van Nostrand KP, Kennedy SD, Turner DH, Mathews DH
Journal of chemical theory and computation.. 2011 November 87 (11):3779-3792. Epub 1900 01 01.
Seetin MG, Mathews DH
Journal of computational chemistry.. 2011 July 3032 (10):2232-44. Epub 04/21/2011.
Noble E, Mathews DH, Chen JL, Turner DH, Takimoto T, Kim B
The Journal of biological chemistry.. 2011 July 1286 (26):22965-70. Epub 05/09/2011.
Harmanci AO, Sharma G, Mathews DH
BMC bioinformatics.. 2011 April 2012 :108. Epub 04/20/2011.
Xu Z, Mathews DH
Bioinformatics.. 2011 March 127 (5):626-32. Epub 12/30/2010.
Liu B, Diamond JM, Mathews DH, Turner DH
Biochemistry.. 2011 February 850 (5):640-53. Epub 01/14/2011.
Mathews DH, Moss WN, Turner DH
Cold Spring Harbor perspectives in biology.. 2010 December 2 (12):a003665. Epub 08/04/2010.
Bellaousov S, Mathews DH
RNA.. 2010 October 16 (10):1870-80. Epub 08/10/2010.
Reuter JS, Mathews DH
BMC bioinformatics.. 2010 March 1511 :129. Epub 03/15/2010.
Réblová K, St?elcová Z, Kulhánek P, Beššeová I, Mathews DH, Van Nostrand K, Yildirim I, Turner DH, Šponer J
Journal of chemical theory and computation.. 2010 March 96 (3):910-29. Epub 1900 01 01.
Liu B, Mathews DH, Turner DH
F1000 biology reports. 2010 January 272 :8. Epub 01/27/2010.
Turner DH, Mathews DH
Nucleic acids research.. 2010 January 38 (Database issue):D280-2. Epub 10/30/2009.
Piekna-Przybylska D, Dichiacchio L, Mathews DH, Bambara RA
Nature structural & molecular biology.. 2010 January 17 (1):83-9. Epub 12/06/2009.
Mathews DH
Methods in molecular biology.. 2010 629 :109-21. Epub 1900 01 01.
Rigby ST, Van Nostrand KP, Rose AE, Gorelick RJ, Mathews DH, Bambara RA
Journal of molecular biology.. 2009 December 11394 (4):694-707. Epub 10/21/2009.
Lu ZJ, Gloor JW, Mathews DH
RNA.. 2009 October 15 (10):1805-13. Epub 08/24/2009.
Harmanci AO, Sharma G, Mathews DH
Nucleic acids research.. 2009 July 37 (12):4063-75. Epub 05/08/2009.
Deigan, K. E.; Li, T. W.; Mathews, D. H.; Weeks, K. M.;.
Proc Natl Acad Sci U S A. 2009; 106(31): 97-102.
Hart JM, Kennedy SD, Mathews DH, Turner DH
Journal of the American Chemical Society.. 2008 August 6130 (31):10233-9. Epub 07/10/2008.
Lu ZJ, Mathews DH
Nucleic acids research.. 2008 July 136 (Web Server issue):W104-8. Epub 05/19/2008.
Lu ZJ, Mathews DH
Nucleic acids research.. 2008 June 36 (11):3738-45. Epub 05/15/2008.
Harmanci AO, Sharma G, Mathews DH
Nucleic acids research.. 2008 April 36 (7):2406-17. Epub 02/26/2008.
Lu ZJ, Mathews DH
Nucleic acids research.. 2008 February 36 (2):640-7. Epub 12/10/2007.
Wilkinson, K. A.; Gorelick, R. J.; Vasa, S. M.; Guex, N.; Rein, A.; Mathews, D. H.; Giddings, M. C.; Weeks, K. M.;.
PLoS Biol. 2008; 6(34): e96.
Shankar N, Xia T, Kennedy SD, Krugh TR, Mathews DH, Turner DH
Biochemistry.. 2007 November 646 (44):12665-78. Epub 10/11/2007.
Andronescu M, Condon A, Hoos HH, Mathews DH, Murphy KP
Bioinformatics.. 2007 July 123 (13):i19-28. Epub 1900 01 01.
Tyagi R, Mathews DH
RNA.. 2007 July 13 (7):939-51. Epub 05/16/2007.
Harmanci AO, Sharma G, Mathews DH
BMC bioinformatics.. 2007 April 198 :130. Epub 04/19/2007.
Mathews DH, Turner DH, Zuker M
Current protocols in nucleic acid chemistry. 2007 March Chapter 11 :Unit 11.2. Epub 1900 01 01.
Duan S, Mathews DH, Turner DH
Biochemistry.. 2006 August 1545 (32):9819-32. Epub 1900 01 01.
Mathews DH
Journal of molecular biology.. 2006 June 9359 (3):526-32. Epub 02/06/2006.
Mathews DH, Turner DH
Current opinion in structural biology.. 2006 June 16 (3):270-8. Epub 05/19/2006.
Mathews DH, Case DA
Journal of molecular biology.. 2006 April 14357 (5):1683-93. Epub 02/03/2006.
Leontis NB, Altman RB, Berman HM, Brenner SE, Brown JW, Engelke DR, Harvey SC, Holbrook SR, Jossinet F, Lewis SE, Major F, Mathews DH, Richardson JS, Williamson JR, Westhof E
RNA.. 2006 April 12 (4):533-41. Epub 02/16/2006.
Uzilov AV, Keegan JM, Mathews DH
BMC bioinformatics.. 2006 March 277 :173. Epub 03/27/2006.
Mathews DH
Current protocols in bioinformatics. 2006 March Chapter 12 :Unit 12.6. Epub 1900 01 01.
Kierzek E, Mathews DH, Ciesielska A, Turner DH, Kierzek R
Nucleic acids research.. 2006 34 (13):3609-14. Epub 07/26/2006.
Lu ZJ, Turner DH, Mathews DH
Nucleic acids research.. 2006 34 (17):4912-24. Epub 09/18/2006.
Mathews DH
Bioinformatics.. 2005 May 1521 (10):2246-53. Epub 02/24/2005.
Kierzek E, Ciesielska A, Pasternak K, Mathews DH, Turner DH, Kierzek R
Nucleic acids research.. 2005 33 (16):5082-93. Epub 09/09/2005.
Mathews D
Current protocols in bioinformatics. 2004 December Chapter 12 :Unit 12.4. Epub 1900 01 01.
Mathews DH
RNA.. 2004 August 10 (8):1178-90. Epub 1900 01 01.
Ruschak AM, Mathews DH, Bibillo A, Spinelli SL, Childs JL, Eickbush TH, Turner DH
RNA.. 2004 June 10 (6):978-87. Epub 1900 01 01.
Mathews DH, Disney MD, Childs JL, Schroeder SJ, Zuker M, Turner DH
Proceedings of the National Academy of Sciences of the United States of America.. 2004 May 11101 (19):7287-92. Epub 05/03/2004.
Matveeva OV, Mathews DH, Tsodikov AD, Shabalina SA, Gesteland RF, Atkins JF, Freier SM
Nucleic acids research.. 2003 September 131 (17):4989-94. Epub 1900 01 01.
Mathews DH, Turner DH
Current protocols in nucleic acid chemistry. 2002 August Chapter 11 :Unit 11.9. Epub 1900 01 01.
Mathews DH, Turner DH
Journal of molecular biology.. 2002 March 22317 (2):191-203. Epub 1900 01 01.
Mathews DH, Turner DH
Biochemistry.. 2002 January 2241 (3):869-80. Epub 1900 01 01.
Diamond JM, Turner DH, Mathews DH
Biochemistry.. 2001 June 1240 (23):6971-81. Epub 1900 01 01.
Mathews DH, Burkard ME, Freier SM, Wyatt JR, Turner DH
RNA.. 1999 November 5 (11):1458-69. Epub 1900 01 01.
Mathews DH, Sabina J, Zuker M, Turner DH
Journal of molecular biology.. 1999 May 21288 (5):911-40. Epub 1900 01 01.
Mathews DH, Banerjee AR, Luan DD, Eickbush TH, Turner DH
RNA.. 1997 January 3 (1):1-16. Epub 1900 01 01.
Li Y, Bevilacqua PC, Mathews D, Turner DH
Biochemistry.. 1995 November 734 (44):14394-9. Epub 1900 01 01.
Herrick DM, Wolfs FL, Bryan DC, Freeman CG, Kurz KL, Mathews DH, Perera PA, Zanni MT
Physical review. C, Nuclear physics.. 1995 August 52 (2):744-754. Epub 1900 01 01.
New Focal Plane Detector System for the Rochester Recoil Mass Spectrometer
Freeman, C. G.; Herrick, D. M.; Bryan, D. C.; Kurtz, K. L.; Mathews, D. H.; Perera, P. A. A.; Wolfs, F. L. H.; Zanni, M. T. ;.
Nuclear Instruments and Methods. 1995; 357(3): 450-457.
Walter AE, Turner DH, Kim J, Lyttle MH, Müller P, Mathews DH, Zuker M
Proceedings of the National Academy of Sciences of the United States of America.. 1994 September 2791 (20):9218-22. Epub 1900 01 01.
Wolfs FL, White CA, Bryan DC, Freeman CG, Herrick DM, Kurz KL, Mathews DH, Perera PA, Zanni MT
Physical review. C, Nuclear physics.. 1994 May 49 (5):2538-2548. Epub 1900 01 01.